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access icon openaccess New microscopic image sequence-driven cell deformation model

It is of great significance that making quantitative description and analysis of the cell morphological change to explore physiological or pathological status of the life. To achieve the cells morphological changes of quantitative description, the authors constructed a cell deformation model based on microscopic image sequence here. Based on the graph regularisation and structured matrix decomposition, the high-dimensional shape space is represented by the linear combination of the low-dimension subshape space, so that the authors get a quantitative indicator which represents the degree of cell deformation–deformation factor. In order to verify the validity of the authors’ model, a deformation feature extraction experiment was performed on three groups of stem cell image sequence with different deformation degree. Compared with other three common quantitative methods of deformation, the authors’ model describes the cell morphological changes more comprehensively, and has better adaptability and stability for describing the diversity of cell movements.

References

    1. 1)
      • 5. Keren, K., Pincus, Z., Allen, G.M., et al: ‘Mechanism of shape determination in motile cells’, Nature, 2008, 453, (719), p. 475.
    2. 2)
      • 1. Pretorius, A.J., Khan, I.A., Errington, R.J.: ‘A survey of visualization for live cell imaging’, Comput. Graph. Forum, 2017, 36, pp. 4663.
    3. 3)
      • 6. Mogilner, A., Keren, K.: ‘The shape of motile cells’, Curr. Biol., 2009, 19, (1), p. R762.
    4. 4)
      • 4. Paluch, E., Heisenberg, C.P.: ‘Biology and physics of cell shape changes in development’, Curr. Biol., 2009, 19, (1), pp. 790799.
    5. 5)
      • 7. Jakob, B., Splinter, J., Durante, M., et al: ‘Live cell microscopy analysis of radiation-induced DNA double-strand break motion’, Proc. Natl Acad. Sci. USA, 2009, 106, (9), pp. 31723177.
    6. 6)
      • 10. Bouwmans, T., Zahzah, E. H.: ‘Robust PCA via principal component pursuit: a review for a comparative evaluation in video surveillance’, Comput. Vis. Image Underst., 2014, 122, pp. 2234.
    7. 7)
      • 8. Xiong, Y., Iglesias, P.A.: ‘Tools for analyzing cell shape changes during chemotaxis’, Integr. Biol. Quant. Biosci. Nano Macro, 2010, 2, (11-1), pp. 561567.
    8. 8)
      • 11. Last, C., Winkelbach, S., Wahl, F. M., et al: ‘A locally deformable statistical shape model’, in ‘International Workshop on Machine Learning in Medical Imaging’ (Springer, Berlin, 2011), pp. 5158.
    9. 9)
      • 3. Ghosh, N.: ‘Video bioinformatics methods for analyzing cell dynamics: a survey. Video bioinformatics’ (Springer International Publishing, Basel, 2015).
    10. 10)
      • 9. Feng, C. M., Liu, J. X., Gao, Y. L., et al: ‘A graph-Laplacian PCA based on L1/2-norm constraint for characteristic gene selection’. IEEE Int. Conf. on Bioinformatics and Biomedicine, Shenzen, China, December 2016, pp. 17951799.
    11. 11)
      • 2. Mohan, K., Luo, T., Robinson, D.N., et al: ‘Computational model for cell shape regulation through mechanosensing and mechanical feedback’, Biophys. J., 2014, 106, pp. 378a378a.
http://iet.metastore.ingenta.com/content/journals/10.1049/joe.2018.8281
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