access icon free Parallel architecture to accelerate superparamagnetic clustering algorithm

Superparamagnetic clustering (SPC) is an unsupervised classification technique in which clusters are self-organised based on data density and mutual interaction energy. Traditional SPC algorithm uses the Swendsen–Wang Monte Carlo approximation technique to significantly reduce the search space for reasonable clustering. However, Swendsen–Wang approximation is a Markov process which limits the conventional superparamagnetic technique to process data clustering in a sequential manner. Here the authors propose a parallel approach to replace the conventional appropriation to allow the algorithm to perform clustering in parallel. One synthetic and one open-source dataset were used to validate the accuracy of this parallel approach in which comparable clustering results were obtained as compared to the conventional implementation. The parallel method has an increase of clustering speed at least 8.7 times over the conventional approach, and the larger the sample size, the more increase in speed was observed. This can be explained by the higher degree of parallelism utilised for the increased data points. In addition, a hardware architecture was proposed to implement the parallel superparamagnetic algorithm using digital electronic technologies suitable for rapid or real-time neural spike sorting.

Inspec keywords: parallel algorithms; parallel architectures; neurophysiology; pattern clustering; medical computing; Markov processes; Monte Carlo methods

Other keywords: data density; Markov process; digital electronic technology; parallel architecture; mutual interaction energy; superparamagnetic clustering algorithm; hardware architecture; real-time neural spike sorting; unsupervised classification technique; Swendsen–Wang Monte Carlo approximation technique; open-source dataset; parallel superparamagnetic algorithm; SPC algorithm

Subjects: Parallel architecture; Data handling techniques; Markov processes; Parallel software; Biology and medical computing; Monte Carlo methods

References

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      • 5. Wang, P.K., Pun, S.H., Chen, C.H., et al: ‘Low-latency single channel real-time neural spike sorting system based on template matching’, PLoS One, 2019, 14, (11), pp. 130.
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http://iet.metastore.ingenta.com/content/journals/10.1049/el.2020.0760
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