Modelling muscle motor conformations using low-angle X-ray diffraction
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- Author(s): J.M. Squire 1 ; H.A. AL-Khayat 1 ; J.J. Harford 1 ; L. Hudson 1 ; T. Irving 2 ; C. Knupp 1 ; M.K. Reedy 3
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View affiliations
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Affiliations:
1:
Biological Structure & Function Section, Biomedical Sciences Division, Faculty of Medicine,
Imperial College London
, London
, UK
2: BioCAT, Dept. Biological, Chemical and Physical Sciences, Illinois Institute of Technology , Chicago , USA
3: Dept of Cell Biology, Duke University , Durham , USA
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Affiliations:
1:
Biological Structure & Function Section, Biomedical Sciences Division, Faculty of Medicine,
Imperial College London
, London
, UK
- Source: IEE Proceedings - Nanobiotechnology, Volume 150, Issue 3, December 2003, p. 103 – 110, DOI: 10.1049/ip-nbt:20031094, Print ISSN 1478-1581, Online ISSN 1740-9748
Abstract
New results on myosin head organization using analysis of low-angle X-ray diffraction patterns from relaxed insect flight muscle (IFM) from a giant waterbug, building on previous studies of myosin filaments in bony fish skeletal muscle (BFM), show that the information content of such low-angle diffraction patterns is very high despite the ‘crystallographically low’ resolution limit (65 Å) of the spacings of the Bragg diffraction peaks being used. This high information content and high structural sensitivity arises because: (i) the atomic structures of the domains of the myosin head are known from protein crystallography; and (ii) myosin head action appears to consist mainly of pivoting between domains which themselves stay rather constant in structure, thus (iii) the intensity distribution among diffraction peaks in even the low resolution diffraction pattern is highly determined by the high-resolution distribution of atomically modelled domain mass. A single model was selected among 5000+ computer-generated variations as giving the best fit for the 65 reflections recorded within the selected resolution limit of 65 Å. Clear evidence for a change in shape of the insect flight muscle myosin motor between the resting (probably like the pre-powerstroke) state and the rigor state (considered to mimic the end-of-powerstroke conformation) has been obtained. This illustrates the power of the low-angle X-ray diffraction method. The implications of these new results about myosin motor action during muscle contraction are discussed.
Inspec keywords: biomechanics; proteins; simulated annealing; molecular configurations; X-ray diffraction; muscle
Other keywords: muscle motor conformations; giant waterbug; Bragg diffraction peaks; myosin head organization; low-angle X-ray diffraction; computer-generated variations; contractile cycle; high structural sensitivity; atomically modelled domain mass; high-resolution distribution; bony fish muscle; lattice-ordered myosin; relaxed insect flight muscle
Subjects: Biomechanics, biorheology, biological fluid dynamics; External and internal data communications, nerve conduction and synaptic transmission; Biomolecular structure, configuration, conformation, and active sites; Interactions with radiations at the biomolecular level
References
-
-
1)
- Huxley, H. E.: `The mechanism of muscular contraction', Science, 1969, 164, p. 1356-1366
-
- 1 onward links are available for this reference.
- CrossRef
-
2)
- Hirose, K., Lockhart, A., Cross, R.A., Amos, L.A.: `Three-dimensional electron cryo-microscopy of dimeric kinesin and ncd motor domains on microtubules', Proc. Natl. Acad. Sci. USA, 1996, 93, p. 9539-9544
-
3)
- Wendt, T.G., Volkmann, N., Skiniotis, G., Goldie, K.N., Muller, J., Mandelkow, E., Hoenger, A.: `Microscopic evidence for a minus-end-directed power stroke in the kinesin motor ncd', EMBO J., 2002, 21, p. 5969-5978
-
4)
- Harford, J.J., Squire, J.M.: `Time-resolved diffraction studies of muscle using synchrotron radiation', Rep. Prog. Phys., 1997, 60, p. 1723-1787
-
- 1 onward link is available for this reference.
- CrossRef
-
5)
- Squire, J.M., Fanchon, E., Geissler, E., Hodeau, L.-L., Regnard, J.-R., Timmins, P.: Fibre and muscle diffraction, Structure and Dynamics of Biomolecules, 2000, (Oxford Univ. PressOxford, UK), p. 272-301
-
6)
- Hopkins, S.C., Sabido-David, C., Van Der Heide, U.A., Ferguson, R.E., Brandmeier, B.D., Dale, R.E., Kendrick-Jones, J., Corrie, J.E., Trentham, D.R., Irving, M., Goldman, Y.E.: `Orientation changes of the myosin light chain domain during filament sliding in active and rigor muscle', J. Mol. Biol., 2002, 318, p. 1275-1291
-
7)
- Reedy, M.K., Lucaveche, C., Naber, N., Cooke, R.: `Insect crossbridges, relaxed by spin-labelled nucleotide, show well-ordered 90° state by X-ray diffraction and electron microscopy, but spectra of electron paramagnetic resonance probes report disorder', J. Mol. Biol., 1992, 227, p. 678-697
-
8)
- Lymn, R.W., Taylor, E.W.: `Mechanism of adenosine triphosphate hydrolysis by actomyosin', Biochemistry, 1971, 10, p. 4617-4624
-
9)
- Reedy, M.K., Holmes, K.C., Tregear, R.T.: `Induced changes in orientation of the crossbridges of glycerinated insect flight muscle', Nature, 1965, 207, p. 1276-1280
-
10)
- Pringle, J.W.S.: `The contractile mechanism of insect fibrillar muscle', Prog. Biophys. Mol. Biol., 1967, 17, p. 1-68
-
- 1 onward link is available for this reference.
- CrossRef
-
11)
- Reedy, M.K., Lucaveche, C., Reedy, M.C., Somasundaram, B.: `Experiments on crossbridge action and filament sliding in insect flight muscle', Adv. Exp. Med. Biol., 1993, 332, p. 33-44
-
12)
- Schmitz, H., Lucaveche, C., Reedy, M.K., Taylor, K.A.: `Oblique section 3-D reconstruction of relaxed insect flight muscle reveals the cross-bridge lattice in helical registration', Biophys. J., 1994, 67, p. 1620-1633
-
13)
- Luther, P.K., Squire, J.M.: `Three-dimensional structure of the vertebrate muscle A-band. II. The myosin filament superlattice', J. Mol. Biol., 1980, 141, p. 409-439
-
14)
- Luther, P.K., Squire, J.M., Forey, P.L.: `Evolution of myosin filament arrangements in vertebrate skeletal muscle', J. Morphol., 1996, 229, p. 325-335
-
15)
- Hibberd, M.G., Trentham, D.R.: `Relationships between chemical and mechanical events during muscular contraction', Ann. Rev. Biophys. Biophys. Chem., 1986, 15, p. 119-161
-
16)
- Xu, S., Gu, J., Rhodes, T., Belknap, B., Rosenbaum, G., Offer, G., White, H., Yu, L. C.: `The M.ADP.P(i) state is required for helical order in the thick filaments of skeletal muscle', Biophys. J., 1999, 77, p. 2665-2676
-
17)
- Rayment, I., Rypniewsky, W.R., Schmidt-Bäse, K., Smith, R., Tomchick, D.R., Benning, M.M., Winkelmann, D.A., Wesenberg, G., Holden, H.M.: `Three-dimensional structure of myosin subfragment-1: a molecular motor', Science, 1993, 261, p. 50-58
-
18)
- Milligan, R.A., Flicker, P.F.: `Structural relationships of actin, myosin, and tropomyosin revealed by cryo-electron microscopy', J. Cell Biol., 1987, 105, p. 29-39
-
19)
- Rayment, I., Holden, H. M., Whittaker, M., Yohn, C. B., Lorenz, M., Holmes, K. C., Milligan, R. A.: `Structure of the actin-myosin complex and its implications for muscle contraction', Science, 1993, 261, p. 58-65
-
- 1 onward links are available for this reference.
- CrossRef
-
20)
- Chen, L.F., Winkler, H., Reedy, M.K., Reedy, M.C., Taylor, K.A.: `Molecular modeling of averaged rigor crossbridges from tomograms of insect flight muscle', J. Struct. Biol., 2002, 138, p. 92-104
-
21)
- Dominguez, R., Freyzon, Y., Trybus, K.M., Cohen, C.: `Crystal structure of a vertebrate smooth muscle myosin motor domain and its complex with the essential light chain: visualization of the pre- power stroke state', Cell, 1998, 94, p. 559-571
-
22)
- Houdusse, A., Kalabokis, V.N., Himmel, D., Szent-Gyorgyi, A.G., Cohen, C.: `Atomic structure of scallop myosin subfragment S1 complexed with MgADP: A novel conformation of the myosin head', Cell, 1999, 97, p. 459-470
-
23)
- Houdusse, A., Sweeney, H.L.: `Myosin motors: missing structures and hidden springs', Curr. Opin. Struct. Biol., 2001, 11, p. 182-194
-
24)
- Houdusse, A., Szent-Gyorgyi, A.G., Cohen, C.: `Three conformational states of scallop myosin S1', Proc. Natl. Acad. Sci. U S A, 2000, 97, p. 11238-11243
-
- 1 onward link is available for this reference.
- CrossRef
-
25)
- Holmes, K.C.: `Muscle proteins-their actions and interactions', Curr. Opin. Struct. Biol., 1996, 6, p. 781-789
-
26)
- Harford, J.J., Squire, J.M.: `“Crystalline” myosin cross-bridge array in relaxed bony fish muscle. Low-angle X-ray diffraction from plaice fin muscle and its interpretation', Biophys. J., 1986, 50, p. 145-155
-
27)
- Reedy, M.K., Squire, J.M., Baumann, B.A.J., Stewart, A., Irving, T.C.: Advanced Photon Source User Activity: Report 2000, 2000 (Argonne National LaboratoryArgonne, IL)
-
28)
- Josephson, R.K., Malamud, J.G., Stokes, D.R.: `Asynchronous muscle: A primer', J. Exp. Biol., 2000, 203, p. 2713-2722
-
29)
- Squire, J.M.: The Structural Basis of Muscular Contraction, 1981 (Plenum PressNY)
-
30)
- Hudson, L., Harford, J.J., Denny, R.C., Squire, J.M.: `Myosin head configuration in relaxed fish muscle: resting state myosin heads must swing axially by up to 150 A or turn upside down to reach rigor', J. Mol. Biol., 1997, 273, p. 440-455
-
31)
- AL-Khayat, H.A., Hudson, L., Reedy, M.K., Irving, T.C., Squire, J.M.: `Myosin head configuration in relaxed insect flight muscle: X-ray modelled resting crossbridges in a pre-powerstroke state are poised for actin binding', Biophys. J., 2003, 85, p. 1063-1079
-
32)
- Squire, J.M., AL-Khayat, H.A., Arnott, A., Crawshaw, J., Denny, R., Diakun, G., Dover, S.D., Forsyth, V.T., He, A., Knupp, C., Mant, G., Rajkumar, G., Rodman, M.J., Shotton, M., Windle, A.H.: `New CCP13 software and the strategy behind further developments: Stripping and modelling of fibre diffr. data', Fibre Diffraction Rev., 2003, 11, p. 7-19
-
33)
- Squire, J.M., Knupp, C., AL-Khayat, H.A., Harford, J.J.: `Millisecond time-resolved low-angle X-ray diffraction: a powerful, high-sensitivity technique for modelling real-time movements in biological macromolecular assemblies', Fibre Diffr. Rev., 2003, 11, p. 28-35
-
34)
- Huxley, H.E., Brown, W.: `The low-angle X-ray diagram of vertebrate striated muscle and its behaviour during contraction and rigor', J. Mol. Biol., 1967, 30, p. 383-434
-
35)
- Reedy, M.K.: `Ultrastructure of insect flight muscle I: screw sense and structural grouping in the rigor crossbridge lattice', J. Mol. Biol., 1968, 31, p. 155-176
-
36)
- Squire, J.M.: `General model of myosin filament structure II: myosin filaments and crossbridge interactions in vertebrate striated and insect flight muscles', J. Mol. Biol., 1972, 72, p. 125-138
-
37)
- Luther, P.K., Munro, P.M.G., Squire, J.M.: `Three–dimensional structure of the vertebrate muscle A–band III: M–region structure and myosin filament symmetry', J. Mol. Biol., 1981, 151, p. 703-730
-
38)
- Squire, J.M.: `Muscle myosin filaments: Internal structure and crossbridge organisation', Comments Molec. Cell. Biophys., 1986, 3, p. 155-177
-
39)
- Kensler, R.W., Stewart, M.: `An ultrastructural study of the crossbridge arrangement in the fish skeletal muscle thick filament', J. Cell Sci., 1989, 94, p. 391-401
-
40)
- Morris, E.P., Squire, J.M., Fuller, G.W.: `The 4-stranded helical arrangement of myosin heads on insect (Lethocerus) flight muscle thick filaments', J. Struct. Biol., 1991, 107, p. 237-249
-
41)
- Squire, J.M.: `Architecture and function in the muscle sarcomere', Curr. Opin. Struct. Biol., 1997, 7, p. 247-257
-
42)
- Eakins, F., AL-Khayat, H.A., Kensler, R.W., Morris, E.P., Squire, J.M.: `3D structure of fish muscle myosin filaments', J. Struct. Biol., 2002, 137, p. 154-163
-
43)
- Squire, J.M., Cantino, M., Chew, M., Denny, R., Harford, J.J., Hudson, L., Luther, P.K.: `Myosin rod-packing schemes in vertebrate muscle thick filaments', J. Struct. Biol., 1998, 122, p. 128-138
-
44)
- Taylor, K.A., Schmitz, H., Reedy, M.C., Goldman, Y.E., Franzini-Armstrong, C., Sasaki, H., Tregear, R.T., Poole, K.J.V., Lucaveche, C., Edwards, R.J., Chen, L.F., Winkler, H., Reedy, M.K.: `Tomographic 3-D reconstruction of quick frozen, Ca2+-activated contracting insect flight muscle', Cell, 1999, 99, p. 421-431
-
45)
- Lewis, R.A., Hall, C., Parker, B., Jones, A., Helsby, W., Sheldon, J., Clifford, P., Hillen, M., Fore, N.: `The “RAPID” high rate area X-ray detector system', Fibre Diffr. Rev., 1996, 5, p. 30-34
-
46)
- Harford, J.J., Squire, J.M.: `Evidence for structurally different attached states of myosin cross-bridges on actin during contraction of fish muscle', Biophys. J., 1992, 63, p. 387-396
-
47)
- Irving, M., Lombardi, V., Piazzesi, G., Ferenczi, M.A.: `Myosin head movements are synchronous with the elementary force-generating process in muscle', Nature, 1992, 357, p. 156-158
-
- 1 onward link is available for this reference.
- CrossRef
-
48)
- Martin-Fernandez, M.L., Bordas, J., Diakun, G., Harries, J., Lowy, J., Mant, G.R., Svennson, A., Townes-Andrews, E.: `Time-resolved X-ray diffraction studies of myosin head movements in live frog sartorius muscle during isometric and isotonic contractions', J. Musle Res. Cell Motil., 1994, 15, p. 319-348
-
49)
- Lombardi, V., Piazzesi, G., Ferenczi, M.A., Thirlwell, H., Dobbie, I., Irving, M.: `Elastic distortion of myosin heads and repriming of the working stroke in muscle', Nature, 1995, 374, p. 553-555
-
50)
- Squire, J.M., Harford, J.J., AL-Khayat, H.A.: `Molecular movements in contracting muscle: towards Muscle – The Movie', Biophys. Chem., 1994, 50, p. 87-96
-
1)

