access icon free Hybrid feature selection method for gene expression analysis

Feature selection is important and necessary for disease classification and prediction using high-dimensional gene expression data. A hybrid method integrating sparse representation with a two-sample statistical t-test to construct features from high-throughput microarray data is presented. The approach takes account of gene interaction and reduces the variable dimension by sparse linear combination, as well as considers the discriminative power of genes using component regression. Under the recurrent independence rule for classification, the experiment results on real data demonstrate the improvements of this hybrid technique over conventional methods.

Inspec keywords: patient diagnosis; feature selection; diseases; lab-on-a-chip; genetics; medical computing

Other keywords: recurrent independence rule; feature selection; sparse linear combination; discriminative power; integrating sparse representation; gene interaction; high-dimensional gene expression data; -sample statistical t-test; component regression; hybrid feature selection method; high-throughput microarray data; disease classification; gene expression analysis; hybrid technique

Subjects: Physics of subcellular structures; Biomedical measurement and imaging; Biology and medical computing; Patient diagnostic methods and instrumentation; Image recognition; Pattern recognition

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http://iet.metastore.ingenta.com/content/journals/10.1049/el.2013.3296
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